PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56719.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 337aa MW: 38256.3 Da PI: 7.7393

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.7	4.9e-14	161	208	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f eL +lP + kK++K++iLe+A++++k+Lq PHT56719.1 161 QHHIIAERKRREKLSQRFVELSAILPDL-----KKVDKSSILEQAINHVKELQ 208 5799**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MDSSSLRWFS RTEEGAYCSN KNKSIDDFTT QQSTISEDQD TTRELSLSPD SNRANSPPYF 60 TKSKVSKIVF SIITPSESCP IQPKMSNNNS SSSPRFLSFN NTNKTSSHHV QGCKIEAVDE 120 MYLCDSSDEK FFPNPNSKSC CYDQKDNTAG RKRIPSTSID QHHIIAERKR REKLSQRFVE 180 LSAILPDLKK VDKSSILEQA INHVKELQEK VQLLEEKKKS TSQQESVMFV SKTQLKMEED 240 EYSSSSAGDL PADIEVRFSD NRVLIRITCA RHNAFVLNIL TEIEKLHLTI IQSCMMPFGK 300 HATDVTVVAK MDESFCMTLK DLAKHLRMIT GRLMTQA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	151	171	RKRIPSTSIDQHHIIAERKRR
2	167	172	ERKRRE
3	168	173	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-37	bHLH family protein