PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56800.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 278aa    MW: 30708.8 Da    PI: 6.2579
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-09191234755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  PHT56800.1 191 IAAKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAIGYVKFLQ 234
                 5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGLVDNYDQY YEGHEFGMND DSSPELYGIN EEPPKSIFEE CDHSEKTSPK IAKNFALSSS  60
NSSLSSPSSS TSNGHSVINF KGGYGNFMHS ANGSFLSFEQ SERFCPNPRM ISGNQVEGSV  120
WEDNNLHYHN SLTPKGSSNT SPRVINENSN NNDDDKVQEE SMQTNKKQCT AASKKGKTNN  180
NSIATKDPQS IAAKNRRERI SERLKILQEL VPNGSKVDLV TMLEKAIGYV KFLQLQVKVL  240
ATDEFWPSQG GKAPDISQVK EAIDAILATQ RGRNSTSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.11e-53bHLH family protein