PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56828.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 350aa    MW: 38906.3 Da    PI: 6.1771
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.71.1e-14163210355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h  +Er+RR+r+ + f +L +l+P +     kKl+Ka+iL  A++YIk+L+
  PHT56828.1 163 QDHVLAERKRRERLTQYFVTLSTLIPDL-----KKLDKASILGDAIKYIKQLE 210
                 56999***********************.....9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MNMNDLQYID HGQTMTTFDD LPFNDNPFTS SIYDDNIQAS QSAGIFEVNP GFRSSTTAIY  60
QNTSFSSPSA SPPPSSSPAV ISFSNSNSPS ATTSTTAARN YFENLNTAVK TEVPSGTTIN  120
FSSSSNISMD SDFEDSQHLF QAMGFGAGEA KKTSNSRSPL QAQDHVLAER KRRERLTQYF  180
VTLSTLIPDL KKLDKASILG DAIKYIKQLE EQVKSLEEET KKYSEEPVAA VKRPRVLTSY  240
DNSTISNENS NKSVPNIEVR ANSDGNVLIR IYCKKQARIV KEIFSQVEML HLNITSSSVI  300
PFGYNTTHLT IVAQMDHQFK NMTTEYVANR IRLSITKLIN SHEEANYPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169174ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-42bHLH family protein