PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56856.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bZIP

Protein Properties

Length: 221aa MW: 25867.7 Da PI: 8.9701

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.1	2.9e-11	116	168	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ rr+ +NRe+ArrsR RK++ +e+L++ v L+ N++L ++l ++ +++ PHT56856.1 116 RKRRRMVSNRESARRSRMRKQKHLENLRNQVNRLKIGNRELMNRLRLITHQYQ 168 5779999*************************************999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MLSTLSATTL SSDGVFSNSF PAFDGGFTPW ECIEPAFLFP RDVEEEEEPV LSPKQSPPPE 60 PVILNSDSGS DDSKPNSIHS SSGSDEPNRN NNNHSNRCPD ERKRHRTTSN RDIDERKRRR 120 MVSNRESARR SRMRKQKHLE NLRNQVNRLK IGNRELMNRL RLITHQYQIF QCDNERLKTE 180 SAILGQRLED IREILRARQL QQQFNSYFAW PCSNYMEQRP H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	120	RKRHRTTSNRDIDERKRRR
2	116	120	RKRRR
3	116	137	RKRRRMVSNRESARRSRMRKQK
4	129	136	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.1	1e-29	bZIP family protein