PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56909.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 238aa    MW: 27023 Da    PI: 5.6499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-17104153356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                 ++GVr+++ +g+W+AeIr p     +  +r +lg+f tae+Aa+a+++ + +++ge
  PHT56909.1 104 FRGVRQRP-WGKWAAEIRNP-----HkaQRLWLGTFATAEDAARAYDKKAVEFRGE 153
                 8*******.**********7.....337************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MNNDCTLPTH KLTRNQEHHY MVSALYHVLS STDDCRMDGE AAQLLREVQN VATSDNSMPR  60
RDIIMDSDSV QPGASSYHIG NSLNVELQQG KKRRRSRTNT KKEFRGVRQR PWGKWAAEIR  120
NPHKAQRLWL GTFATAEDAA RAYDKKAVEF RGEKAKTNFP IEEYIDGVVT NDQNRTPMVV  180
VEDEEAVQNV MNGAEVAAVG AVNNAHNIDV ENSMENDKDD FWENLEEDGL VKMITRTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.14e-28ERF family protein