PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57031.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 323aa    MW: 35717.7 Da    PI: 10.0653
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.6e-32252309359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYegeHnh+
  PHT57031.1 252 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERASDDPTMLIVTYEGEHNHS 309
                 99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MAVDLMMDYR NTSNNCINFV TKLEEKAVVQ EAASGLESVE KLIRMLSRNK SPQIQQQNKS  60
PMEIELVADA AVTKFKKVIS LLDRNRTGHA RFRRAPLAAT TSPSPTNCNK DIVDTKVYSP  120
TPIQQVPLVS YEHYNPLVPP KTISFSYSPE MSRTNSFNIS SLTGDTESKQ YSSSSAAFQI  180
TNLSSQVTNS AGKPPLSSSS LKRKCSLSEN AVSGKCSGPS GRCHCSKRRK LRLKRVIRVP  240
AISMKLADIP PDDYSWRKYG QKPIKGSPHP RGYYKCSSVR GCPARKHVER ASDDPTMLIV  300
TYEGEHNHSL SVAETSSLIL ESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.13e-80WRKY family protein