PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57068.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 92aa    MW: 10362.7 Da    PI: 10.1071
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.63.8e-0723591854
                HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +  ++L++llP+ + + +s K s + +L+++++YI++L
  PHT57068.1 23 ELVSKLQQLLPEiR-NRRSSKASASKVLQETCNYIRNL 59
                56689*******77.899999***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRQSS TGSSRISDDQ IIELVSKLQQ LLPEIRNRRS SKASASKVLQ ETCNYIRNLN  60
RQVDDLSDRL SQLLSTIDAD SPEAAIIRSL LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39860.14e-21bHLH family protein