PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57138.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 312aa    MW: 35289.5 Da    PI: 4.6305
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.71.9e-17110200187
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 f+k+l +sdv++++r+v+pkk ae++    +   +e++ +t++d +g  +W+++++y  +++s++yvl+ ++ +F + ++L++gD + ++++++
  PHT57138.1 110 FDKQLQNSDVSSLRRIVVPKKAAERYlpalE--IKEGFPITMNDMDGiHVWSFRYRYwpNNSSRMYVLE-NTGDFIQTHELRQGDYFALHYNDQ 200
                 89**************************544..557788********9*********888899999999.******************998753 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAMMDITEAY GVMADGNATL VGDTHTTSNM MNNVAPFPPI PIPIPISIQQ QQQPHNHTHT  60
TKGSRSQRRR RSSLNFASLD FPSFLSHVPS PPPTLPPACV LEPTGFKFLF DKQLQNSDVS  120
SLRRIVVPKK AAERYLPALE IKEGFPITMN DMDGIHVWSF RYRYWPNNSS RMYVLENTGD  180
FIQTHELRQG DYFALHYNDQ KQIYGIEARK AGSGPVFRGY EAEDVILTDY AQATDDGNGN  240
GVLKNEAEMD MSSFYFPAMD NEMDMSFIYD TSFWNEPAFD FVGGPMTYYS TNVNPTPSFG  300
SIEDSFPVDD FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.17e-50B3 family protein