PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57149.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 217aa MW: 24109.7 Da PI: 6.3808

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00048	48	70	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C++ F ++ L H++ H PHT57149.1 48 FSCLYCSRKFCTSQALGGHQNAH 70 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MADPSQQQLV YDFWNQLQST TDMVDPSSSI IPIPKPKPKV PSASSRMFSC LYCSRKFCTS 60 QALGGHQNAH KRERAASRRN MFSTPTTAAA ATDSSSSDHT NNRVRLHFLQ NNDNMDPSSL 120 IMPQQNIIIH DDAAAANTYG NPNYNMMMTS NANYCCFQQT PPNVNNFNPF SSDGFYTPPP 180 PPDLGHHVYF ATADGDAAQD LSTIDERQLN LDLTLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14010.1	9e-16	C2H2 family protein