PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57319.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 757aa MW: 82637.8 Da PI: 7.4082

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.7e-09	547	584	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + PHT57319.1 547 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 584 664459******************************88 PP
2	BELL	116.9	9.5e-38	408	479	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+e ++rY++y+eq+q+v++sF+ v+g g+a pYtslA+ka+SrhFrcLkdaia q+ PHT57319.1 408 DRIEHQRRKVKLLSMLDEAHRRYNHYCEQMQMVVNSFDLVMGFGAAIPYTSLAQKAMSRHFRCLKDAIATQL 479 589******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MGIATQVTTS PCVTSHNSKG HQYPVIHQVL ENLNSMSQDY HHHSLFSFPN GFEREQHHQQ 60 QQQQQQQHMA GQQIRRDKLR VQGFEPQSFE EETSGLPAVY ETAGMLSEMF NFPPGAAAPN 120 ATELIETQFN PNFRQPNPNL NPRPQQIHAA AMGNEWFGNR QGMLVGGGAS QQLGYAKNHT 180 PNAAESMQLF LMNPQPRSPS PSPDPNSTSS RLHMLLPNPS STSTLQGFPN PAEGSFGQFM 240 TWGSTGASAA TATHHLNNPN EIGGVNVAES QGLSLSLSSS LQHKAEELQM SGETGGMLFF 300 NQGGPSTSGQ FRYKNLNMGG SGVSPNIHQV HVGYGSSLGV VNVLRNSRYA KAAQELLEEF 360 CSVGRGKFKK NNNKAAATNP NSYPSGGNSG GSNNETSSKD VPPLSAADRI EHQRRKVKLL 420 SMLDEAHRRY NHYCEQMQMV VNSFDLVMGF GAAIPYTSLA QKAMSRHFRC LKDAIATQLK 480 HSCELLGEKD AGTSGLTKGE TPRLKMLEQS LRQQRAFHQM GMMEQEAWRP QRGLPERSVN 540 ILRAWLFEHF LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMV EDMYQQEAKE 600 EEEGVGDEKS QSQNSGNNII TQTPNSMSNS SSTNMTTITT TAAAPTTTTA LGAAETATAA 660 TAITVTSSKR SLINAPDSDP SLVPINSFSH NQATFPTNIH DPDAAACRRG GGDGTTTNTH 720 DHMGSTMIRF GTTAGDVSLT LGLRHAGNLP ENTHFFG

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MGIATQVTTS PCVTSHNSKG HQYPVIHQVL ENLNSMSQDY HHHSLFSFPN GFEREQHHQQ  60
QQQQQQQHMA GQQIRRDKLR VQGFEPQSFE EETSGLPAVY ETAGMLSEMF NFPPGAAAPN  120
ATELIETQFN PNFRQPNPNL NPRPQQIHAA AMGNEWFGNR QGMLVGGGAS QQLGYAKNHT  180
PNAAESMQLF LMNPQPRSPS PSPDPNSTSS RLHMLLPNPS STSTLQGFPN PAEGSFGQFM  240
TWGSTGASAA TATHHLNNPN EIGGVNVAES QGLSLSLSSS LQHKAEELQM SGETGGMLFF  300
NQGGPSTSGQ FRYKNLNMGG SGVSPNIHQV HVGYGSSLGV VNVLRNSRYA KAAQELLEEF  360
CSVGRGKFKK NNNKAAATNP NSYPSGGNSG GSNNETSSKD VPPLSAADRI EHQRRKVKLL  420
SMLDEAHRRY NHYCEQMQMV VNSFDLVMGF GAAIPYTSLA QKAMSRHFRC LKDAIATQLK  480
HSCELLGEKD AGTSGLTKGE TPRLKMLEQS LRQQRAFHQM GMMEQEAWRP QRGLPERSVN  540
ILRAWLFEHF LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMV EDMYQQEAKE  600
EEEGVGDEKS QSQNSGNNII TQTPNSMSNS SSTNMTTITT TAAAPTTTTA LGAAETATAA  660
TAITVTSSKR SLINAPDSDP SLVPINSFSH NQATFPTNIH DPDAAACRRG GGDGTTTNTH  720
DHMGSTMIRF GTTAGDVSLT LGLRHAGNLP ENTHFFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-137	TALE family protein