PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57473.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 160aa MW: 18575.9 Da PI: 9.8814

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57473.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104	8.3e-33	78	136	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk++++prsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H+h+ PHT57473.1 78 LDDGYRWRKYGQKAVKNNNYPRSYYRCTHEGCNVKKQVQRLSKDEGVVVTTYEGMHTHP 136 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MENNQPMLLL GSASSYYNSM NGGLKTSSTQ ISRDQMEVDT SENHNKYISS LSVKKKGDNK 60 KIKKPRFAFQ TRSQVDILDD GYRWRKYGQK AVKNNNYPRS YYRCTHEGCN VKKQVQRLSK 120 DEGVVVTTYE GMHTHPIDKP NDNFEQILHQ MQIFPNHPLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	2e-52	WRKY family protein