PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57667.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 217aa MW: 25118.4 Da PI: 9.1828

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.8	8.1e-32	138	196	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK vk+s++prsYYrCt+++C+vkk+++r ++d+++v++tYeg Hnh+ PHT57667.1 138 LDDGFKWRKYGQKAVKNSTHPRSYYRCTHHTCNVKKQIQRHSKDTSIVVTTYEGIHNHP 196 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MQHYNSTIMD SGKEPPPLLS TDLSPANFFM QQPNDQMPMQ NNYHSQVGLD CDNIDWAGLL 60 SAGPSINNES IATTSNVSIN HRNMNTNMME GGEQHQQQLL PQQQQHEVCR RDKGRIIKKR 120 KYVPPRIAFH TRSTEDILDD GFKWRKYGQK AVKNSTHPRS YYRCTHHTCN VKKQIQRHSK 180 DTSIVVTTYE GIHNHPCEKL METLSPILKQ LQFLSRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	1e-55	WRKY family protein