PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57669.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 326aa    MW: 37078.2 Da    PI: 6.0515
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.41.5e-28137195259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s ++  ++++tY+ eHnh+
  PHT57669.1 137 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSCTEHGIFIVTYTAEHNHS 195
                 79*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MMIMDWGLQA VVIGSSSTSC SDIHGSNYVD FSPNLDFQES EYLSFSHHHH QHHEMKKEVY  60
SDELEQLYKP FYHVGGQNML MGSSISLVPK EVIKEEKREE EQQQVVAASN TYVPKYKKRK  120
NEQKRVVLQL KADDLSSDKW AWRKYGQKPI KGSPYPRSYY RCSSSKGCLA RKQVEQSCTE  180
HGIFIVTYTA EHNHSQPTRR NSLAGTTKSK FPNSKNSINS PKKIVKEEKI TSPHCSTSNL  240
GLSPEAARMI DEFPEINQEN NIIIGGDNNY YDEDGMRNIF EGSDENECVS IEEMFDGDFF  300
AGLEDIHDGF NSSFGCNNSA FPFSST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.19e-34WRKY family protein