PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57671.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 258aa    MW: 28513.8 Da    PI: 5.3404
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.6e-0594116123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC++Cg+ Fs    L  H+r+H
  PHT57671.1  94 YKCSICGEEFSLGQALGGHMRKH 116
                 9*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MSTPSTTTDM TLTLKRSITE EESVEKFAMA NCVDIMKMNE LSGRHELFKC KTCEKQFDSF  60
QALGGHRTSH KNKKNKLMAT STNNDSLPVK PKKYKCSICG EEFSLGQALG GHMRKHRDEL  120
NQSKQNKKKK LEESESGECA LKEESESGER ALQESSKSGE CALKEESKSG ECALEESSKS  180
GECALKEESK SGECALEESS KSGECALKEG SKSGECAEAF HDKEDLGDTK RTLFLDLNYT  240
PYENELMTGI SPFSFGCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.11e-23C2H2 family protein