PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57773.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 434aa MW: 48932.1 Da PI: 7.0298

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.5e-12	258	304	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er RR+++N++f Lr+++P+ K++Ka+ L Av YI++L PHT57773.1 258 KNHVEAERLRREKLNHRFYALRSVVPNV-----SKMDKASLLADAVTYINEL 304 589**********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MMQEIISTSS STTSPALLNT LQKRLQYIIH TRQEWWVYAI FWQASKDANG RLIFSWEDGH 60 FRGTKDLAMA EVRITNADNN VGDPEMFYAV SATNCFVSED DLITHTFNSG CHIWLNNYYE 120 SQLYNYDRAK EAHLHGIRTL VCISTPHGVV ELGSSEVIQE NLELIQLNRS LFGLSNKNSP 180 SQSNHQGLSS FNFVPLGSHH IQKVDTNNNP EIYIGNKSSD SGNSDYDNES SAMYNTNSAK 240 KRGRKSSSST TTERIMAKNH VEAERLRREK LNHRFYALRS VVPNVSKMDK ASLLADAVTY 300 INELKAKVEE LENSKSECQK PKRNYVDTVM ELYGSRNNIN SSFGWCNSTG AYGIEVEVKI 360 IGVEAMVRVR SPNVSYPCAR LMNVLRELEF QIHHASVASV KDMMIQDVVI GVPPNLTNEE 420 ALKSVILTKL SVIT

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MMQEIISTSS STTSPALLNT LQKRLQYIIH TRQEWWVYAI FWQASKDANG RLIFSWEDGH  60
FRGTKDLAMA EVRITNADNN VGDPEMFYAV SATNCFVSED DLITHTFNSG CHIWLNNYYE  120
SQLYNYDRAK EAHLHGIRTL VCISTPHGVV ELGSSEVIQE NLELIQLNRS LFGLSNKNSP  180
SQSNHQGLSS FNFVPLGSHH IQKVDTNNNP EIYIGNKSSD SGNSDYDNES SAMYNTNSAK  240
KRGRKSSSST TTERIMAKNH VEAERLRREK LNHRFYALRS VVPNVSKMDK ASLLADAVTY  300
INELKAKVEE LENSKSECQK PKRNYVDTVM ELYGSRNNIN SSFGWCNSTG AYGIEVEVKI  360
IGVEAMVRVR SPNVSYPCAR LMNVLRELEF QIHHASVASV KDMMIQDVVI GVPPNLTNEE  420
ALKSVILTKL SVIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-65	bHLH family protein