PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57794.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 267aa MW: 29905.2 Da PI: 8.7702

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.6	7.5e-40	37	98	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k++ ++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknkksss PHT57794.1 37 KDQVVNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKKSSS 98 78999*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MDTANWPQEI VAKPMEEIIG SSKPNNCVER KLVRPQKDQV VNCPRCNSTN TKFCYYNNYS 60 LSQPRYFCKT CRRYWTEGGS LRNIPVGGGS RKNKKSSSSN NNHVIINNPL MKKLPDLIVP 120 PLIQRDVEEY PKRHFGNRPD NSTVLPQHHH DENPSKIIHE GSQDLNLGFS SDFKTLIQVG 180 NYDGGNKDNN NSTNNISTLP EPSSQLPSLN FSLDHHGLGN NNAHTGYGFF FPFVGLKQVS 240 NATDHVRDQS TNNGYWNAML GGGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	1e-44	Dof family protein