PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57810.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 469aa MW: 51744.9 Da PI: 6.0075

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	22.7	1.9e-07	168	193	1	26
RWP-RK 1 aekeisledlskyFslpikdAAkeLg 26 aek+isle+l++yF+ ++kdAAk+Lg PHT57810.1 168 AEKTISLEVLQQYFAESVKDAAKSLG 193 589**********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MADSIPSVEY QNCRGVPSNS EVIQRSGIAL TKMVYDFRKC PCVLELFHVL RLSLGVQKNS 60 RFYQIELQYP AGALVRVLFD AWDIQLSADV DSTTLTSTCV VTKKFLSPSS VANRRTRPDL 120 MEEQQSPEVL NGAKGAEGVN ATAEAHNHAS FSENKQTGKK SERKRGKAEK TISLEVLQQY 180 FAESVKDAAK SLGGMTDSPC KASEYYEEKN EFSNHGTPAS HEEAEPSNQM LGSRIIGNEE 240 LSPKQNGFVR EGSHRSRTGS FSREESTGTP TSHGSCQGSP CPANESSPQN ELDNSPTQES 300 VMKLDKAKDQ FPLPAEKMPQ FSTRHEVTSI TIKATFDFVS SGIFKLKEEV AKRLKLEVDV 360 TATVEEHNMI VDNPSTASKD EEKVKSVSLG ERKNYPFERF NISDEAPKKL TQLINDYSEG 420 IADGLLKHHA GRDCGPFLAA YAEYLSDGLQ VPNDGLDAGL LRKRYATLL

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MADSIPSVEY QNCRGVPSNS EVIQRSGIAL TKMVYDFRKC PCVLELFHVL RLSLGVQKNS  60
RFYQIELQYP AGALVRVLFD AWDIQLSADV DSTTLTSTCV VTKKFLSPSS VANRRTRPDL  120
MEEQQSPEVL NGAKGAEGVN ATAEAHNHAS FSENKQTGKK SERKRGKAEK TISLEVLQQY  180
FAESVKDAAK SLGGMTDSPC KASEYYEEKN EFSNHGTPAS HEEAEPSNQM LGSRIIGNEE  240
LSPKQNGFVR EGSHRSRTGS FSREESTGTP TSHGSCQGSP CPANESSPQN ELDNSPTQES  300
VMKLDKAKDQ FPLPAEKMPQ FSTRHEVTSI TIKATFDFVS SGIFKLKEEV AKRLKLEVDV  360
TATVEEHNMI VDNPSTASKD EEKVKSVSLG ERKNYPFERF NISDEAPKKL TQLINDYSEG  420
IADGLLKHHA GRDCGPFLAA YAEYLSDGLQ VPNDGLDAGL LRKRYATLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-12	Nin-like family protein