PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57939.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 285aa    MW: 30453.2 Da    PI: 5.314
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.3e-16119166355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+ +l+g
  PHT57939.1 119 FRGIR-CR-SGKWVSEIREPRK---TRRIWLGTYPTPEMAAAAYDVAAMALKG 166
                 89**9.55.6*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MADSSQNPTK YSSQLNQHPA SSEITKVPFQ LIPQPLPPPP PPLPPPPVPP QPQIQTTHNL  60
VETISSSPSP SSNIGISTSP KIVQQPNIII PTITTMSSTS SGGSGSSPGR PTGGKHAVFR  120
GIRCRSGKWV SEIREPRKTR RIWLGTYPTP EMAAAAYDVA AMALKGSDAI INFPNNINSY  180
PSLPPSPSAA DIRKAAATAA ALMKVETGEA TSGTTQPGTD DQSSENMHMN IETKDHEYID  240
EEALFDMPNL LVDMAEAMMV SPPRMNSPRS DDSPGNSDAE SLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-39ERF family protein