PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58146.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 247aa    MW: 27974.4 Da    PI: 4.9893
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58146.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-134892554
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +   Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A+eYI++L
  PHT58146.1 48 NIVSERNRRRKLNERLFALRAVVPNiS------KMDKASIIKDAIEYIQDL 92
                5567*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MENISEDYNN YWETAMFLPS EEFDSCFDEA ISSYYDSSSP DGAQSSKNIV SERNRRRKLN  60
ERLFALRAVV PNISKMDKAS IIKDAIEYIQ DLHEQEKRIR AEILVLESGR SKKNNDVEFD  120
QDGSFDLKPK RSKRLEQQYG YDSSGSTTRS SPSSSPVDVL ELKVSSMREK TMVVSLTCSK  180
RRDTMVKVCE VFESLNAKII SANITAFSGT ILKIAFIEAE GEERDILKLR IESAIASLND  240
PHSPMSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-68bHLH family protein