PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58248.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ARR-B
Protein Properties Length: 554aa    MW: 61699.3 Da    PI: 6.1543
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.21.6e-27310364156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k +++WtpeLH++Fv+aveqL G+++A+P++il++mkv+gLt+++++SHLQkYR++
  PHT58248.1 310 KVKVDWTPELHKKFVQAVEQL-GIDQAIPSRILDVMKVEGLTRHNIASHLQKYRMH 364
                 5689*****************.********************************96 PP
2Myb_DNA-binding42.61.4e-13313362248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT+e+++++v+av+qlG +   +++I   m  +g+t+ ++ s++qky+
       PHT58248.1 313 VDWTPELHKKFVQAVEQLGIDqaIPSRILDVMKvEGLTRHNIASHLQKYR 362
                      57***********************************************7 PP
3Response_reg31.31e-11201261109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+ d++ + +  +++ lek +y +v ++ + +eal  +  k   +++ ++ ++  + dG+  l+ +++++ +lp i+ +   + +++ +++ +Ga 
    PHT58248.1  20 VLLLDEDSNSAAEMKSRLEKMDY-IVYTFCNESEALSAISSKSegFHVAIVEVSAGDNDGV--LQFLESAK-NLPTIMTSNIHSLSTMMKCIALGAV 112
                   799999999**************.***************777777************9995..66666666.9*******9999************* PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   +fl Kp + ++l +
    PHT58248.1 113 EFLQKPLSDDKLKN 126
                   **********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    
MICIEDELLG WKDFPKGLKV LLLDEDSNSA AEMKSRLEKM DYIVYTFCNE SEALSAISSK  60
SEGFHVAIVE VSAGDNDGVL QFLESAKNLP TIMTSNIHSL STMMKCIALG AVEFLQKPLS  120
DDKLKNIWQH VVHKAFNARK DVSGPLEPVK ESLLSMLQLQ PEKGEPDDQS SNGTEPLIAV  180
ADNNTEQLSG CDKYPAPSTP QLKQGVRSVD DSDCHDHTIF STDQDSGEHD EENGSSPHQN  240
MEADIATFSQ TNDCADNSDG SSPHQKTEAD IATTSSQSKD CPDNSISHSA EPSKASGPHS  300
SSGTKSNKKK VKVDWTPELH KKFVQAVEQL GIDQAIPSRI LDVMKVEGLT RHNIASHLQK  360
YRMHRRQILP REVERRWPHP QPRDSVQRNY YPHKPVMTFP PYHSNHVAPA GQCYPAWVPP  420
ASYPNGLQVW GSPYYPGWQP AETWHWKPHP GLLADTWGSP VMPPSFGSYP PYPQNAGMYQ  480
PHGMHNRYSM LEKSFDVHPA EEVIDKVVKE AITKPWLPLP LGLKPPSMEG VLDELSRQGI  540
STVPPRINGS RCWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-131ARR-B family protein