PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58306.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bZIP

Protein Properties

Length: 399aa MW: 42206.2 Da PI: 6.7609

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58306.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	66	6.4e-21	302	364	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae++eL++++++L++eN aL+ e+++++ ++ l +++ PHT58306.1 302 ERELKRQKRKQSNRESARRSRLRKQAECDELAQRAEVLKEENAALRAEVNRIRSDYEHLLAQN 364 89********************************************************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MGSGEMDKSS KEAKDAKESK TPNSQEQTST PTAGPVNPDW SGFQAYSPMP PHGFMTSSPQ 60 APHPYMWGVQ QFMPPYGTPP HPYVAMYPHG GIYAHPSMPP GSYPFSPFAM PSPNGVAEAS 120 VSNPGNVEVD GKSSEGKEKL PIKRSRGSLG SLNMITGKNN GPGKTSGASA NGVHSKSAES 180 GSEGSSEGSD AHSQNESPMN SGGRQDSADT SQNGNAAHGS QNGGTAATHS MINQTMAIVS 240 APGAGGIPGP ATNLNIGMDY WGAATSSPIP AMHGRVPVSV AGGLVTAGSR DSVQSQMWIQ 300 DERELKRQKR KQSNRESARR SRLRKQAECD ELAQRAEVLK EENAALRAEV NRIRSDYEHL 360 LAQNASLKER LGEVPGEEVP RTGQDDHHSS QTESHQGDQ

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MGSGEMDKSS KEAKDAKESK TPNSQEQTST PTAGPVNPDW SGFQAYSPMP PHGFMTSSPQ  60
APHPYMWGVQ QFMPPYGTPP HPYVAMYPHG GIYAHPSMPP GSYPFSPFAM PSPNGVAEAS  120
VSNPGNVEVD GKSSEGKEKL PIKRSRGSLG SLNMITGKNN GPGKTSGASA NGVHSKSAES  180
GSEGSSEGSD AHSQNESPMN SGGRQDSADT SQNGNAAHGS QNGGTAATHS MINQTMAIVS  240
APGAGGIPGP ATNLNIGMDY WGAATSSPIP AMHGRVPVSV AGGLVTAGSR DSVQSQMWIQ  300
DERELKRQKR KQSNRESARR SRLRKQAECD ELAQRAEVLK EENAALRAEV NRIRSDYEHL  360
LAQNASLKER LGEVPGEEVP RTGQDDHHSS QTESHQGDQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	319	325	RRSRLRK
2	319	326	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-145	bZIP family protein