PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58456.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 151aa MW: 17547.9 Da PI: 4.4734

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.7	4.7e-07	5	44	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W e+de+l+++ k ++ W+ Ia +g Rt qc++r+ k PHT58456.1 5 WEREDDEKLLHLAKIMPQQ-WTIIAPILG--RTSSQCIERYDK 44 999************99.****8..*******976 PP
2	Myb_DNA-binding	24.8	4.9e-08	51	92	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W e+de+l+++ k ++ W+ Ia+ +g Rt qc++r+ k+l PHT58456.1 51 WEREDDEKLLHLAKIMPQQ-WTIIASILG--RTSSQCIERYDKLL 92 999************99.****8..********8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MVRGWEREDD EKLLHLAKIM PQQWTIIAPI LGRTSSQCIE RYDKILDGEG WEREDDEKLL 60 HLAKIMPQQW TIIASILGRT SSQCIERYDK LLDGENYDKL LPWEIESHPD QSKPAPPDPI 120 NMDDDEKKML SHAPQIPDYE LEAIEKIGAK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	4e-33	MYB family protein