PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58473.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HD-ZIP
Protein Properties Length: 840aa    MW: 93355.7 Da    PI: 4.9796
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.46.9e-2099154156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t  q++e+e+lF+++++p+ ++r +L++ lgL+ rqVk+WFqNrR+++k
  PHT58473.1  99 KKRYHRHTVRQIQEMEALFKECPHPDDKQRLKLSQDLGLKPRQVKFWFQNRRTQMK 154
                 688899***********************************************998 PP
2START147.31.4e-463045311206
                 HHHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGG...CT-TT-SEEEEEE CS
       START   1 elaeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddke...qWdetlakaetle 83 
                 ela++ ++elvk+ + +ep+W     ++ g+evl  +e s+               ++ea r s+vv+m++ +lv  +ld+++    +   + +a+t++
  PHT58473.1 304 ELALSSMNELVKMCTMGEPLWIWGH-NDSGKEVLNVEEYSRMfpwpvgvkqnsneLRIEATRSSAVVIMNSITLVDAFLDTNKcieLFPSIISRAKTIQ 401
                 578999***************9998.66677777666666667777789999******************************99999999999****** PP

                 EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--S CS
       START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkg 174
                 v++sg      g lqlm++e+q+l+plv+ R+ +f+Ry++q  ++g+w+ivd  +ds  ++   +++   +++pSg++i++++ng+s+vtwveh+++++
  PHT58473.1 402 VVTSGvsehasGSLQLMFMEMQVLTPLVStRECYFLRYCQQnVEEGSWAIVDFPLDSLHNNF-PAPFPYFKRRPSGCIIQDMPNGYSRVTWVEHAEVEE 499
                 *****************************************99**************99998.58888888**************************** PP

                 SXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 175 rlphwllrslvksglaegaktwvatlqrqcek 206
                 + + ++++ +v sg+a+ga++w++ lqrqce+
  PHT58473.1 500 NPVNQIFNNFVTSGMAFGAQRWLSILQRQCER 531
                 ******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 840 aa     Download sequence    
MFSDCQLFSS MGMGGNNGVS SESLYSSTIQ NPNFNFMAMG GNNLPFNIFP PNIIPKEENG  60
LFKSKEEMDS GSGSEHIEGM SGNELELPEQ QQQQPPGKKK RYHRHTVRQI QEMEALFKEC  120
PHPDDKQRLK LSQDLGLKPR QVKFWFQNRR TQMKAQQDRS DNVILRAEND NLKNENYRLQ  180
AALRSIMCPT CGGPAMLGEM GFDEQQLRLE NARLKEEFER VCCLVSQYNG RGPMQGLGSP  240
PPLLPPSLEL DMSITNFPRK FEDQPTMPNC ADMVPVPLLM PDQNNSQFSG GPMIMEEEKS  300
LAMELALSSM NELVKMCTMG EPLWIWGHND SGKEVLNVEE YSRMFPWPVG VKQNSNELRI  360
EATRSSAVVI MNSITLVDAF LDTNKCIELF PSIISRAKTI QVVTSGVSEH ASGSLQLMFM  420
EMQVLTPLVS TRECYFLRYC QQNVEEGSWA IVDFPLDSLH NNFPAPFPYF KRRPSGCIIQ  480
DMPNGYSRVT WVEHAEVEEN PVNQIFNNFV TSGMAFGAQR WLSILQRQCE RLASLMARNI  540
SDLGVIPSPE ARKSLMNLSQ RMIKTFCMNI STSCGQSWTA LSDSLEDTVR ITTRKVTEPG  600
QPNGLILSAV STSWLPYNHF QVFDLLRDER RRAQLDVLSN GNSLHEVAHI ANGSHPGNCI  660
SLLRINVASN SSQSVELMLQ ESCTDDSGSL VAYTTVEVDA IQLAMNGEDP SCIPLLPLGF  720
VITPVNGQTN NINNSDNISS SEANSSAQSS EKRQNLSSIQ EYSGGCLLTI GLQVLASTIP  780
TAKLNLSSVT AINHHLCNTV QQINAALVAF YPESGINAAS SPPPRQPESS KQADENSNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein