PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58492.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 215aa    MW: 23462 Da    PI: 10.4888
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind189.83.2e-5855215135301
   GAGA_bind 135 lpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSa 233
                  + + + +++k++  + k+ r+++ k  k +++++ks++skk++ ++++  ++  +kk   +     s D s+lP+P CsCtG++r+CYk G GGWqS+
  PHT58492.1  55 AKFKAKSQKIKKNMPPMKGIRETVSKLLKVERPENKSSASKKTKGEARCG-EATVTKKPKSV----ASADFSGLPPPFCSCTGVSRKCYKCG-GGWQSS 147
                 33445566667777777777778888888888877777777777776665.45555555554....589*********************99.9***** PP

   GAGA_bind 234 CCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 CCtt++S yPLP ++ ++g R++grKmS+ga++klL  La+eG dlsnpvDLk+hWAkHG nkf ti+
  PHT58492.1 148 CCTTSLSEYPLPWNPSKPGYRLTGRKMSNGAYNKLLFTLATEGCDLSNPVDLKNHWAKHGSNKFTTIK 215
                 *******************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MASQVNHKEE TFDSHFPRMH QVNFTPATKF GSESKPCAAV PIRSVAPTGG QNVNAKFKAK  60
SQKIKKNMPP MKGIRETVSK LLKVERPENK SSASKKTKGE ARCGEATVTK KPKSVASADF  120
SGLPPPFCSC TGVSRKCYKC GGGWQSSCCT TSLSEYPLPW NPSKPGYRLT GRKMSNGAYN  180
KLLFTLATEG CDLSNPVDLK NHWAKHGSNK FTTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.34e-51BBR-BPC family protein