PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58777.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 351aa    MW: 40179.2 Da    PI: 4.7753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-09233278555
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  +++ r+RR++i ++ +eL +l+P         +++ ae+L+ + eYIk Lq
  PHT58777.1 233 QSIAARQRRKKITEKTQELGKLIPGgH------RMNTAEMLQATFEYIKFLQ 278
                 57888*******************955......9*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MASLSYYAAS KLEPNVQEFN SGEMNMQKQL PAELLFDFKY DFGQNFYVEN PDEACYFNPF  60
FDPDEFILPV ETIDNSCFMP EFSDLESTPK RQKVFQDNFL PENVRTPSHN SCFMSEYSDY  120
ESTPKRQKVF QDNYLPKNTI PPSQNSTFVP EYSVFESTPK RQKVFQDNCL PSNNLFNWGF  180
VPPNPPIFQD FSSYSLPEIS MPVFSSGCCD NNAAVVAKKG SSSTYNEKKM SAQSIAARQR  240
RKKITEKTQE LGKLIPGGHR MNTAEMLQAT FEYIKFLQAQ AGLLEFMGSY KENEKSFDTP  300
DLHKLVGSSL IQEKLYSSEK CLVPKGFLEA LQNNQEFQNS QGIEEIKSLI K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-23bHLH family protein