PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58782.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 201aa    MW: 22768.4 Da    PI: 6.0274
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-17106156255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g ++AeIr p     k +r +lg++ t+e+Aa a+++a+ k++g
  PHT58782.1 106 RYRGVRRRP-WGTFAAEIRNP---DrKGARLWLGTYETPEDAALAYDQAAYKIRG 156
                 7********.**********8...3245*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MYQQTTITIS DSDLSILENI KFHLVNDSDF SQILSMFDPL ISNVDTINSP NSSFGSSQSA  60
VEMSWGDMVT NIDSTWEQVD KLEHEDVAKE EPIVARGVHA PVDWNRYRGV RRRPWGTFAA  120
EIRNPDRKGA RLWLGTYETP EDAALAYDQA AYKIRGSKAR LNFPHLIGSD VYEPVRVAPR  180
KRCHSSESSS IENAPLQKRK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-43ERF family protein