PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58783.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 201aa    MW: 22503.8 Da    PI: 7.1629
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-19108158255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +  k++r +lg++ t+e+Aa a+++a+ k++g
  PHT58783.1 108 RYRGVRRRP-WGKFAAEIRDPDK--KNARLWLGTYETPEDAALAYDQAAFKIRG 158
                 8********.**********844..45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MNPNDFSLLQ SIQHHLLNDS DIPDIFSTID SNNSPRSSFS NSPSTTENNF HYGEFTPLIN  60
PSTTENNFYY GELTPLINPC STTTLGPTEN PEETAAASVS HAPQDWKRYR GVRRRPWGKF  120
AAEIRDPDKK NARLWLGTYE TPEDAALAYD QAAFKIRGSK ARLNFPHLVG SGVPEPARVN  180
PRRRSHSPES SSENGTPKKL F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.19e-41ERF family protein