PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58786.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 227aa    MW: 25213 Da    PI: 9.4706
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-1696146255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y GVr++  +g ++AeIrdp   + k +r +lg++  +e+Aa a+++a+ k++g
  PHT58786.1  96 RYIGVRRRQ-WGTFAAEIRDP---NrKGARLWLGTYEKPEDAALAYDQAAFKMRG 146
                 699***887.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MNPVDDESFS SDFDLLESIK QHLLNDSDFS DFFSPMSHSN NLDSPNSPSS SLVSTQNSLE  60
EITVLQSRQD PSLESEDRKR GLEVAHQEAA PGDWRRYIGV RRRQWGTFAA EIRDPNRKGA  120
RLWLGTYEKP EDAALAYDQA AFKMRGSKAR LNFPHLIGPD MPMLVRVKGS RRAHSSESSS  180
SSSSSSSSSS SSSTSSENGA RKRKIDVINS IAKAKLVRHS LIKLQVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.19e-33ERF family protein