PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58971.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 277aa MW: 31774.6 Da PI: 5.5916

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	47.1	7.7e-15	7	117	11	128
NAM 11 deelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgelvglkktL 106 de+l+ yL k v gk++++ + i+ vd+y +P++L ++ + ++ y F+k +kk+++gk+ nr + +g Wk ++k+v++++ +++g +kt+ PHT58971.1 7 DEQLM-AYLLKFVCGKPIQC-QQIQVVDLYGNnKPSQLFNT--TITSVNYVFTKLKKKTRNGKNINRgiVGGDGSWKGINNSKPVYNREMSVIGFQKTF 101 66666.9***********.77**97648632..224567**************7445599********************* PP NAM 107 vfykgrapkgektdWvmheyrl 128 f +g W m+eyrl PHT58971.1 102 RFDEG------IHVWNMKEYRL 117 843......457******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MGNNFDDEQL MAYLLKFVCG KPIQCQQIQV VDLYGNNKPS QLFNTTITSV NYVFTKLKKK 60 TRNGKNINRG IVGGDGSWKG INNSKPVYNR EMSVIGFQKT FRFDEGIHVW NMKEYRLTDE 120 TIAVLRKRCQ ILHEDFVVCR ITYHVPKPKQ LTAKSSAQYQ FQENQELGGS NAATVVPYDQ 180 FSSIWNGNEY SITQETPHVS SNDDIARYHR ELDAYAASIL ESVSPIDHIA HRELDAYAAT 240 TLEFDMNSSL DPYVPQDEDY CSLFCEDFYI GHTDLWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	8e-13	NAC family protein