PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT59055.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 212aa MW: 23462.6 Da PI: 6.3818

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT59055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.7	3.7e-06	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC +C ++ H PHT59055.1 4 LCDVCESAAAILFCAADEAALCCSCDQKVH 33 7*************************9998 PP
2	zf-B_box	25.7	2.4e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H PHT59055.1 52 KIQRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGgkrtH 91 6689**************************9995544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCCSCDQ KVHMCNKLAS RHVRVGLAAP SKIQRCDICE 60 NAPAFFYCEI DGSSLCLQCD MIVHVGGKRT HGRYLLIRQR IEFPGDKLGP SNELGLPSTE 120 QGDGRREPAQ PFKLPMIDNH QPNREIAMAG LENNVNNSVK MENELIDLNS RPQRIHGQTS 180 NNQEQGMDMR SGNNHESVGV VPDGPFKREP EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	2e-83	DBB family protein