PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59117.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family YABBY
Protein Properties Length: 217aa    MW: 24086.5 Da    PI: 7.6187
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY226.38e-70231816170
       YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvssekls 102
                 s eq+CyvqCnfC+t+lavsvP +s fk vtvrCGhCt+llsvn+     + a + hl +s+  +  ll+e +++  +l +n+  + +     +s  ++
  PHT59117.1  23 SGEQLCYVQCNFCDTVLAVSVPCSSFFKNVTVRCGHCTNLLSVNIILP--TAANQLHLPHSFFSPqnLLDEIRNNPPTLLMNQPINPN-----ES-LMP 113
                 579***************************************998755..45566778888765523667776666666555433322.....22.357 PP

       YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     +e+p++p ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  PHT59117.1 114 VRGVDELPKPPVANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 181
                 788999***999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MSSSSAAFAP DHHLHHHHLS PPSGEQLCYV QCNFCDTVLA VSVPCSSFFK NVTVRCGHCT  60
NLLSVNIILP TAANQLHLPH SFFSPQNLLD EIRNNPPTLL MNQPINPNES LMPVRGVDEL  120
PKPPVANRPP EKRQRVPSAY NRFIKDEIQR IKAGNPDISH REAFSAAAKN WAHFPHIHFG  180
LMPDQPVKKP NACQQEGEDV LMKEGFLGPA NIGVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.16e-87YABBY family protein