PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59285.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 258aa    MW: 28912.9 Da    PI: 10.3522
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.15.8e-20191241155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++k +grW+AeIrd ++   ++r +lg+f+taeeAa a+++a+ +++g
  PHT59285.1 191 KKYRGVRQRK-WGRWAAEIRDKRN---NTRRWLGTFDTAEEAAVAYDEAAIEING 241
                 59*******9.**********543...4999********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MNAKEYSHTL TKLAKYAPSI VANNRNLQGI CKAGSDVCFG CGKLGYRVRE CPVVSHRGKD  60
LCQQGQSNVS SAPESRPTKQ GATSTATNAM ASNDEHHQNV AVEKPSKIER VEKSTKKAGK  120
SSVVMPRVVR IYMTDNDATD SSSDEEEMLH GDNSQRPKKL WIREIMIENG RTRVISKKKS  180
KEKKLLQVNM KKYRGVRQRK WGRWAAEIRD KRNNTRRWLG TFDTAEEAAV AYDEAAIEIN  240
GANALTNILE PPLKKINP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-23ERF family protein