PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT59287.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 356aa MW: 40745.6 Da PI: 4.7601

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT59287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	27.1	1e-08	40	78	12	53
AP2 12 rgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 + rW+AeIrd ++ + r+ lg+f+taeeA a+++a ++ PHT59287.1 40 NSRWAAEIRDKRN---NIRHCLGSFDTAEEAVVAYDEATIEI 78 679*****533...4******************97765 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MNSHLGHCTW ARQGSIYLGR DVPRLDGPSD RPSHLGGSNN SRWAAEIRDK RNNIRHCLGS 60 FDTAEEAVVA YDEATIEIFN IPSNRTSVAA RLHPQLYELT LQALSQSGAE DNEHGEEEFL 120 KRDDPNANSP STEEFFKTFN IDRYPMKMQC DSAIDLMSDF VVKSAMEKSF DAFRKILREQ 180 KLDAYFRESS FGKYLDLSED NNACFQMKMV YDILKRRFMY ENKDKMDDML INYCGIIVDI 240 TVEATAEEHN IIVYNPSTAS KEEEKLEPVS SGEWKNYPFE GNCGPFVVAY AEYLSDGLQV 300 PNDGLDSGLL RKRYAAFLWK YGEAKAQKPY TSDTKDLRRP KPNSVILDEE QLVHID

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MNSHLGHCTW ARQGSIYLGR DVPRLDGPSD RPSHLGGSNN SRWAAEIRDK RNNIRHCLGS  60
FDTAEEAVVA YDEATIEIFN IPSNRTSVAA RLHPQLYELT LQALSQSGAE DNEHGEEEFL  120
KRDDPNANSP STEEFFKTFN IDRYPMKMQC DSAIDLMSDF VVKSAMEKSF DAFRKILREQ  180
KLDAYFRESS FGKYLDLSED NNACFQMKMV YDILKRRFMY ENKDKMDDML INYCGIIVDI  240
TVEATAEEHN IIVYNPSTAS KEEEKLEPVS SGEWKNYPFE GNCGPFVVAY AEYLSDGLQV  300
PNDGLDSGLL RKRYAAFLWK YGEAKAQKPY TSDTKDLRRP KPNSVILDEE QLVHID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11140.1	4e-08	ERF family protein