PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59288.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 143aa    MW: 16624.2 Da    PI: 10.5485
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2452.6e-1458108155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++ykGV ++k +g+W Ae+r+       +  r+++g+f t ee a a+++  ++++g
  PHT59288.1  58 KKYKGVGQRK-QGKWMAEVRVlR-----TkDRIWIGTFNTVEEVALAYDKTINEIKG 108
                 59*******9.9*********65.....34**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MKLTTDEEGK AKPPKERSQR YMKRHVKRNP LLKNENTEVI SIENSLERNL KLPQEKLKKY  60
KGVGQRKQGK WMAEVRVLRT KDRIWIGTFN TVEEVALAYD KTINEIKGAY TVTNILKPPP  120
RYPSPTEINY MNPPSSSIDN ARI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.13e-17ERF family protein