PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59353.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 266aa    MW: 29465.7 Da    PI: 5.4383
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-2093142255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r++  +g+W+AeIrdp++     r++lg+f taeeAa+a+++a+k+++g
  PHT59353.1  93 KYRGIRQRT-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDEAAKRIRG 142
                 8*****999.**********954...4************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MCGGAIISDY EPVGNLCWKL STRDLWAELD PISDYWSSSS SSPIAGKPDS AHSSTHSVDK  60
PKKSDSAKSA QLKKGTSVKV EKESSGPRPR KNKYRGIRQR TWGKWAAEIR DPRKGVRVWL  120
GTFNTAEEAA RAYDEAAKRI RGDKAKLNFP QSLSTPSSPA KRQCASTTVP DPPALLESSN  180
IISDYSSLMN FGYPNETVPY YLMEVAAAAD QDNHHDDYEL KEQISNLESF LELEPADSSQ  240
FSGIVDSDPF NVFLMEDFAA TQQPVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-39ERF family protein