PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT59681.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 330aa MW: 36112.7 Da PI: 8.7044

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT59681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160	9.6e-50	14	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 lppGfrF+Ptdeelvv+yLk+kv + +l++ ++i+ev++yk++PwdLp e+e yfFs+++ ky++g+r+nrat+sgyWkatg dk+++ k + PHT59681.1 14 LPPGFRFRPTDEELVVQYLKRKVFSFPLPA-SIIPEVEVYKSDPWDLPGD---MEQEKYFFSTKEVKYPNGNRSNRATTSGYWKATGIDKQIVMKsqqQ 108 79**************************.89***********54...46799*******************************986666 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++lvglkktLvfy+g++p+g +t+W+mheyrl PHT59681.1 109 QQLVGLKKTLVFYRGKSPHGCRTNWIMHEYRL 140 666*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MEKVDFVKNG VLRLPPGFRF RPTDEELVVQ YLKRKVFSFP LPASIIPEVE VYKSDPWDLP 60 GDMEQEKYFF STKEVKYPNG NRSNRATTSG YWKATGIDKQ IVMKSQQQQQ LVGLKKTLVF 120 YRGKSPHGCR TNWIMHEYRL ANFQSNNHPT QGNWVICRIF LKKRGTTKNE EENARNIGGA 180 VACIAEKKKK KKNALVFYDF MGRDNKNGTA ATTTSSSSTT SSGITDLTTN NEESDENVES 240 VAADVEFVAT DVESDGIHQT SLSGGFICSN SFSICCNINN NVFVFFGGGV GDLGVGIGGI 300 GGGLCGIGRG IGCGSGGPSV AMGERSVGRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	9e-85	NAC family protein