PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59709.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 302aa    MW: 33408.1 Da    PI: 9.4619
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.11.1e-31145201158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq Rak+e e+k  +k+rkpylheSRh+hA+rR+RgsgGrF
  PHT59709.1 145 EEPVYVNAKQYHGILRRRQIRAKAELERKA-IKARKPYLHESRHQHAMRRERGSGGRF 201
                 69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MPTIAKHDGR QLETGLRITS LSTIQMQPWW QGYGGNTMPF ASENPVAQGK SEGSNKEKET  60
KALAVESGSD GNSEQYNQNL KNIAPTTAVI MAEQQKELTG HSAMLTPYPY PDMQYGGMMT  120
YGAPVHPHLF EIHHARMPLP LDMEEEPVYV NAKQYHGILR RRQIRAKAEL ERKAIKARKP  180
YLHESRHQHA MRRERGSGGR FLNTKKPNDK DHIPETQKYC STIPTHSGNS SGSGSSDQGG  240
KEGYTVQDMH KGDTHSFSTG NGHGSSVYFA QSTASEQGNG HYSRGNWSLL VNQASQGAAS  300
RN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.15e-39NF-YA family protein