PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59840.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 227aa    MW: 25186.1 Da    PI: 4.8296
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59840.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.15.1e-3045103259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC++kk+ver+++d ++++itY+++Hnh+
  PHT59840.1  45 SDCWSWRKYGQKPIKGSPYPRGYYRCSSSkGCSAKKQVERCSKDASLFIITYTSSHNHP 103
                 699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MKRGLFSVFS DSSECPDIRK IGQKVVVKVQ MEGKAIKQKN EGPPSDCWSW RKYGQKPIKG  60
SPYPRGYYRC SSSKGCSAKK QVERCSKDAS LFIITYTSSH NHPGPNLPNN KDTVTQDSTA  120
TLPQQDQEPT VDKDVLLKDN GDSTTTTTTA TSISQGIPEE NLFTDSFLGT ISYDDFLPLS  180
YPQLMEFPKS ELSEENDFYD ELGKLQLPPS STSFAGIFEE AILVDPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-34WRKY family protein