PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59909.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 223aa    MW: 25114.2 Da    PI: 8.2134
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.65.1e-0970115855
                 HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  Er+RR ++ + ++ L++l+P+ +   +  K +   i+++ ++YIk L+
  PHT59909.1  70 KERKRRGKMAEMYSLLQSLVPSiS---HIHKATREKIVTESTDYIKRLE 115
                 6*********************99...*******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MWQEMMKEEA EEEEIERLFM GVMGGYKDAC MPPLTEFSAM DEMGCSSFGG NKRQRKEGPV  60
AITPSDSIQK ERKRRGKMAE MYSLLQSLVP SISHIHKATR EKIVTESTDY IKRLEEEILR  120
LKNLKKSLPE LLVSKPALCQ CRNRVSSVNA TVSKGLAFFG IQCQLTQGLM TNIFSVLEKH  180
QAEVLAANIS VSDHRLATLA ITVMIGNSES SAIEKIRREL LLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01260.15e-08bHLH family protein