PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT59950.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 925aa MW: 104817 Da PI: 7.6806

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT59950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.7	7.6e-52	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e k rwl+++ei+aiL n++ +++ ++ + p+sg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e++ptf rrcyw PHT59950.1 30 EEaKMRWLRPNEIHAILCNYKYFNIFVKPVNLPTSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDQPTFVRRCYW 128 45599******************************************************************************************** PP CG-1 101 lLeeelekivlvhylevk 118 lL+++le+ivlvhy+e++ PHT59950.1 129 LLDKSLEHIVLVHYRETQ 146 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 925 aa Download sequence
MESSTAGQLI GKDIHGFRTL QDLDIPSIME EAKMRWLRPN EIHAILCNYK YFNIFVKPVN 60 LPTSGTIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDQP 120 TFVRRCYWLL DKSLEHIVLV HYRETQETRG SPATSVAKGS PATPVNSSSS SDPSDPSGWV 180 LSEESNSVDE QAYGASQHAH LATNRDMTVK THEQRLLEIN TLDWDELLAP NDPNKLMATQ 240 EAGGRALVGQ LNQCEVNGYS LNDGSLSASR VPIASLESLV GQVAGSDTVN VNPSNDMPFR 300 SGDGQMTSNF EKNESGVMTV GAGDSFDNLN KDGLQTQDSF GRWINYFISD SPGSADEMMT 360 PESSVTIDQS YVMQQIFNIT EISPPWALSS EETKILVIGH FPGRQSELAK SNLVCVCADV 420 CFPAEFVQFG VYRCVISPQA PGLVNLYLSF DGNTPISQVM PFEFRAPSAH KWTAPLEDQS 480 NWDEFRFQMR LAHLLFSTSK SLSIFSSKVH QDSLKDAKRF VRKCAHITDN WEYLIKSIEN 540 RKVPFIHAKD CLFELSLQTK FHEWLLERVI EGCKKSERDE QGQGVIHLCA ILGYTWAVYP 600 FTWSGLSLDY RDKYGWTALH WAAHYGREKM VATLLSAGAK PNLVTDPNSE NPDGSTAADL 660 ASKNGFEGLG AYLAEKALVA HFKDMTLAGN VSGSLQTATE PINPGNFTEE DLYLKDTLAA 720 YRTAADAAAR IQAAFREHSF KVQTKAVESL NPEIEARNIV AAMKIQHAFR NYESRKKLAA 780 AARIQYRFRT WKMRKEFLTM RRHAIRIQAV FRGFQVRRQY RKIIWSVGVL EKAVLRWRLK 840 RKGFRGLQVQ SSEAVDNIKP DGDVEEDFFR ASRKQAEERV ERSVVRVQAM FRSKRAQEEY 900 RRMKLEHNNA TLEYERLFNP DIQIV

Sequence ? help Back to Top

Protein Sequence Length: 925 aa Download sequence

MESSTAGQLI GKDIHGFRTL QDLDIPSIME EAKMRWLRPN EIHAILCNYK YFNIFVKPVN  60
LPTSGTIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDQP  120
TFVRRCYWLL DKSLEHIVLV HYRETQETRG SPATSVAKGS PATPVNSSSS SDPSDPSGWV  180
LSEESNSVDE QAYGASQHAH LATNRDMTVK THEQRLLEIN TLDWDELLAP NDPNKLMATQ  240
EAGGRALVGQ LNQCEVNGYS LNDGSLSASR VPIASLESLV GQVAGSDTVN VNPSNDMPFR  300
SGDGQMTSNF EKNESGVMTV GAGDSFDNLN KDGLQTQDSF GRWINYFISD SPGSADEMMT  360
PESSVTIDQS YVMQQIFNIT EISPPWALSS EETKILVIGH FPGRQSELAK SNLVCVCADV  420
CFPAEFVQFG VYRCVISPQA PGLVNLYLSF DGNTPISQVM PFEFRAPSAH KWTAPLEDQS  480
NWDEFRFQMR LAHLLFSTSK SLSIFSSKVH QDSLKDAKRF VRKCAHITDN WEYLIKSIEN  540
RKVPFIHAKD CLFELSLQTK FHEWLLERVI EGCKKSERDE QGQGVIHLCA ILGYTWAVYP  600
FTWSGLSLDY RDKYGWTALH WAAHYGREKM VATLLSAGAK PNLVTDPNSE NPDGSTAADL  660
ASKNGFEGLG AYLAEKALVA HFKDMTLAGN VSGSLQTATE PINPGNFTEE DLYLKDTLAA  720
YRTAADAAAR IQAAFREHSF KVQTKAVESL NPEIEARNIV AAMKIQHAFR NYESRKKLAA  780
AARIQYRFRT WKMRKEFLTM RRHAIRIQAV FRGFQVRRQY RKIIWSVGVL EKAVLRWRLK  840
RKGFRGLQVQ SSEAVDNIKP DGDVEEDFFR ASRKQAEERV ERSVVRVQAM FRSKRAQEEY  900
RRMKLEHNNA TLEYERLFNP DIQIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein