PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59958.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 173aa    MW: 19665.1 Da    PI: 10.3878
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.2e-055072123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C++ F ++  L  H++ H
  PHT59958.1 50 FECQYCHREFANSQALGGHQNAH 72
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MGESSLHSSL SSSSPRQVKL FGFQVTECDK TTEPPPPPPQ PSHDVEGKRF ECQYCHREFA  60
NSQALGGHQN AHKKERQRTR RAHQIGDHQP RFRQVVPMIN AHAVRSGLIN NNNKSIMSRY  120
YGARLRSQVL SGAPLRFQIH MRQQQLMAVQ NPVDINNNEA EVDLHLRLAP SKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.19e-15C2H2 family protein