PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60010.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 1141aa MW: 127849 Da PI: 8.4345

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.8	5.8e-09	48	83	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++e+ ++++a +++G++ Wk++a+t+ Rt++++ PHT60010.1 48 QWSEEDLTRFYQAYRKYGKD-WKKVASTVK-FRTAEMV 83 6***************99.****9.*9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1141 aa Download sequence
MAPAKKSKSI NKRLSPTTEI SPSKDGNGDN GKKSLQRKRK LSDMLGPQWS EEDLTRFYQA 60 YRKYGKDWKK VASTVKFRTA EMVEALYTMN RAYLSLPEGT ASVAGLIAMM TDHYCNLAAS 120 DSEQESNEDA GMSRKPQKRA WGKVHPNISK TSEMTSSALA ASHGCLTLLK KKRSGGSRPR 180 AVGKRTPRFP VSFSYENPKG EKYFSPSGQS LKVQPDDTDD DVKIALVLTE ASQRGGSPQF 240 SKTPSRWTDG AMFSPIGTAE RKRVKVDMGN AKLLSNEVDE EEGSMEADTG DLMRYKNDFE 300 EAETVGRTTQ KQKRPHGKKL EVDDSGENHF DDIKEACSGT EEGQRLGAAR GKLEMEATDE 360 KNARASLQGP RKRSKKVLFG RDESSAFDAL QTLADLSLMM PAAENEDESM MQVKDEIDDH 420 VNESGSLEAV PAHKQRDKRG SAGVKSRWSQ SLSKFEVTSS RTSKHGKVTS SDVNAVPETK 480 QARRAQKAMS SKARKAEGHV DYDVTESQEA AVKDASKKST SKGKRSYQCV SPKLIKDQEH 540 SSCADPRIER SDSAQSTAQI PVENQVNLPN KVRSRRKMDL KKPQKQKDLK IPDKSLDDTS 600 ASFTALRDKA FSLKKKISSC LSNHQVRRWC TYEWFYSAID YPWFAKREFV EYLYHVGLGH 660 VPRLTRVEWG VIRSSLGKPR RFSEQFLNEE KEKLNQYRES VRSHYTELRE GTREGLPTDL 720 ARPLSVGQLV IAIHPKTREI HDGNVLTVDH SRCRVQFDRP ELGVEFVMDI DCMPLNPFEN 780 MPTLLTRHAD AVDKFFESFN ELKMNARANE FMKFPAGDST ENGDVSSHFS PPSHPVSNLL 840 KQTKVASAEA DVQSKSGVME TTVYQQIAYS KPSTVAQIQA KEADVQALAE LTRALDKKDA 900 VVLELRLMND DVLENQKSDD CSLKDSEPFK KQYAAVLIQL NEVNEQVSSA LYRLRQRNTY 960 HGSIPLAWQR PVPNFADPSI LSTFDRCTSQ PQESGFLVNE IIESSKIKSW TMVDAAVQAM 1020 LSYTGRDNTT EKIEEAIDYV NDWIPLDDSC MPIPPDLKSK NVSDRRNEAE IPSELITKCV 1080 ATLLMIQKCT ERQFPPADVA KVLDSAVASL QPCCSQNFPV YAEIQKCMGI IRNQIMALIP 1140 T

Sequence ? help Back to Top

Protein Sequence Length: 1141 aa Download sequence

MAPAKKSKSI NKRLSPTTEI SPSKDGNGDN GKKSLQRKRK LSDMLGPQWS EEDLTRFYQA  60
YRKYGKDWKK VASTVKFRTA EMVEALYTMN RAYLSLPEGT ASVAGLIAMM TDHYCNLAAS  120
DSEQESNEDA GMSRKPQKRA WGKVHPNISK TSEMTSSALA ASHGCLTLLK KKRSGGSRPR  180
AVGKRTPRFP VSFSYENPKG EKYFSPSGQS LKVQPDDTDD DVKIALVLTE ASQRGGSPQF  240
SKTPSRWTDG AMFSPIGTAE RKRVKVDMGN AKLLSNEVDE EEGSMEADTG DLMRYKNDFE  300
EAETVGRTTQ KQKRPHGKKL EVDDSGENHF DDIKEACSGT EEGQRLGAAR GKLEMEATDE  360
KNARASLQGP RKRSKKVLFG RDESSAFDAL QTLADLSLMM PAAENEDESM MQVKDEIDDH  420
VNESGSLEAV PAHKQRDKRG SAGVKSRWSQ SLSKFEVTSS RTSKHGKVTS SDVNAVPETK  480
QARRAQKAMS SKARKAEGHV DYDVTESQEA AVKDASKKST SKGKRSYQCV SPKLIKDQEH  540
SSCADPRIER SDSAQSTAQI PVENQVNLPN KVRSRRKMDL KKPQKQKDLK IPDKSLDDTS  600
ASFTALRDKA FSLKKKISSC LSNHQVRRWC TYEWFYSAID YPWFAKREFV EYLYHVGLGH  660
VPRLTRVEWG VIRSSLGKPR RFSEQFLNEE KEKLNQYRES VRSHYTELRE GTREGLPTDL  720
ARPLSVGQLV IAIHPKTREI HDGNVLTVDH SRCRVQFDRP ELGVEFVMDI DCMPLNPFEN  780
MPTLLTRHAD AVDKFFESFN ELKMNARANE FMKFPAGDST ENGDVSSHFS PPSHPVSNLL  840
KQTKVASAEA DVQSKSGVME TTVYQQIAYS KPSTVAQIQA KEADVQALAE LTRALDKKDA  900
VVLELRLMND DVLENQKSDD CSLKDSEPFK KQYAAVLIQL NEVNEQVSSA LYRLRQRNTY  960
HGSIPLAWQR PVPNFADPSI LSTFDRCTSQ PQESGFLVNE IIESSKIKSW TMVDAAVQAM  1020
LSYTGRDNTT EKIEEAIDYV NDWIPLDDSC MPIPPDLKSK NVSDRRNEAE IPSELITKCV  1080
ATLLMIQKCT ERQFPPADVA KVLDSAVASL QPCCSQNFPV YAEIQKCMGI IRNQIMALIP  1140
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein