PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT60015.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 355aa    MW: 40012 Da    PI: 5.0206
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT60015.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-1758106355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  PHT60015.1  58 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 106
                 56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MSSSSSTPIS SDNNNQLPFG MFEPIRTPTG YSWLQRNTAI CQSSEKRGRR KQAEPGRFLG  60
VRRRPWGRYA AEIRDPTTKE RHWLGTFDTA QEAALAYDRA ALSMKGTQAR TNFIYTSDSA  120
NTNFPSLISP FDHVQNMLQP NLSHFNFNTT QSNNNIIKNK NIVMTTATTT TTTTSDHSNE  180
SSSYGSSPNE NNSFFVNNNN NNNSGYLLDC IVPDSCLKPP PPTSSTPRSK MIRTLQENND  240
NHQNITTFYG ANAMDPEKFS FNKYGYLDEE KYMSSTWESS CELSAMMMNN NIGNMNQMLD  300
DVGNCYYPNM ENAVFDNSNI NNDELMMMPT ETPTTTSSSV YQPFGDVEFG YTTLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.15e-47ERF family protein