PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT60063.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 218aa    MW: 25107.9 Da    PI: 6.1581
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT60063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS21.33e-074794183230
        GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLkl 230
                 + +++d+e+++L+v+pgE la+n++l l +++des+ ++++ d++L++
  PHT60063.1  47 SVHTSDVEIKDLNVRPGEPLAINFALVLNHMHDESTGTQNHSDRLLRM 94 
                 348899***************************************997 PP
2GRAS102.56.2e-3294198259364
        GRAS 259 ealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
                  al+yy ++++s+++ lpr+++eri+vE+++l+r+i+n++  e+a+r+erhe le+Wr+r++ aGFkp++ls+++++++k+ll+++++  y+++ ++g 
  PHT60063.1  94 MALNYYLSVLESIDVALPRDHKERINVEQHCLARKIMNILEYEEAKRVERHELLERWRSRFSVAGFKPYSLSSSINATIKTLLENYYQS-YTLDMKNGV 191
                 69*************************************************************************************55.********* PP

        GRAS 358 lvlgWkd 364
                 l++gW++
  PHT60063.1 192 LYFGWMN 198
                 *****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MQPLGVYILE GLVARLDSLG SSIYKALKFK EPTSVELFSI CTCFMKSVHT SDVEIKDLNV  60
RPGEPLAINF ALVLNHMHDE STGTQNHSDR LLRMALNYYL SVLESIDVAL PRDHKERINV  120
EQHCLARKIM NILEYEEAKR VERHELLERW RSRFSVAGFK PYSLSSSINA TIKTLLENYY  180
QSYTLDMKNG VLYFGWMNGD ESQFGCFFCL EIVILPEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.12e-60GRAS family protein