PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60068.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 870aa MW: 98594.7 Da PI: 6.0919

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2.1e-11	670	716	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR ++N+++ Lr++ P++ +K + a++++ A++YI++L PHT60068.1 670 TKHFATERQRRVHLNDKYTALRKMFPNP-----GKIDRASVVKDAIDYINEL 716 68************************.....9*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MDCRAPKKGK KKDQANMIES NKECDDLCAM FSECNLVGNP REWWMDSGAT HHVCANKELF 60 SSFAPAQVEE MICMANSVMA KVEETGKVGL KMTSGKVLTL NNVLYVPELC RNLISVSLLD 120 KNGFKCATVS EKIIISKGEV HEQSSERSKR PRDEPSEDVH NEENPRRSTR QRTSTSFGLN 180 FVTFLLENEP QTFKEAMSSS NSSFWKEAVN SEIDSILSNH TWEFVDLPPG NKSLGSKWIF 240 KRKMKVDDDM LIISRDISDI NATKRMLESK FYMKDLGVAD VILGIRIHRT PQGLTLSQSH 300 YIENALDKFK YMKFGIAKAP LDVSFALRKN EDWRSQELGS MRSNKVVSDR HEYGSPVRDV 360 STEICTEYVR QSTKVLQQKT KKMYVEESGC FDAATHHVQN DGVLAEDVFA IQEQQTYHHN 420 PSQQDVAAAA AAALEIEFQQ QLNLEMEECY NNTHNNNMQD QLIHDQQNNN NNNNNNNNNN 480 NNNSNQGLSC DQSNWGEMNF PPYQNQEDSN NINNHNNFQQ QNFPIPMSDA PYLTTPDLLN 540 MFPLPICSQS SLLPQKSPNL LTSLELIGDI DGGASTSNAV YDPSLVLPLN LPPQPPLLRE 600 LFHSFPHGYG LRNLRSNNNT SFFNGMEERD QVNGALYQDN GEGRPFDNGI FEFSTDMNDI 660 AKNRAGIKVT KHFATERQRR VHLNDKYTAL RKMFPNPGKI DRASVVKDAI DYINELKRGV 720 NELKLMVEKK RCSKDRIKRQ KKEDGTSLDG LDAKQMDEVE QSYNGNSLRS SWLQRRSKNT 780 EVDVRIVDDE VTVKLVQQKR INCLLFASKV LDELQLDLHH VAGGLIGDYY SFLFNSKISE 840 GSTVYASAIA MKLIEVVDIQ YAAIAPANSY

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MDCRAPKKGK KKDQANMIES NKECDDLCAM FSECNLVGNP REWWMDSGAT HHVCANKELF  60
SSFAPAQVEE MICMANSVMA KVEETGKVGL KMTSGKVLTL NNVLYVPELC RNLISVSLLD  120
KNGFKCATVS EKIIISKGEV HEQSSERSKR PRDEPSEDVH NEENPRRSTR QRTSTSFGLN  180
FVTFLLENEP QTFKEAMSSS NSSFWKEAVN SEIDSILSNH TWEFVDLPPG NKSLGSKWIF  240
KRKMKVDDDM LIISRDISDI NATKRMLESK FYMKDLGVAD VILGIRIHRT PQGLTLSQSH  300
YIENALDKFK YMKFGIAKAP LDVSFALRKN EDWRSQELGS MRSNKVVSDR HEYGSPVRDV  360
STEICTEYVR QSTKVLQQKT KKMYVEESGC FDAATHHVQN DGVLAEDVFA IQEQQTYHHN  420
PSQQDVAAAA AAALEIEFQQ QLNLEMEECY NNTHNNNMQD QLIHDQQNNN NNNNNNNNNN  480
NNNSNQGLSC DQSNWGEMNF PPYQNQEDSN NINNHNNFQQ QNFPIPMSDA PYLTTPDLLN  540
MFPLPICSQS SLLPQKSPNL LTSLELIGDI DGGASTSNAV YDPSLVLPLN LPPQPPLLRE  600
LFHSFPHGYG LRNLRSNNNT SFFNGMEERD QVNGALYQDN GEGRPFDNGI FEFSTDMNDI  660
AKNRAGIKVT KHFATERQRR VHLNDKYTAL RKMFPNPGKI DRASVVKDAI DYINELKRGV  720
NELKLMVEKK RCSKDRIKRQ KKEDGTSLDG LDAKQMDEVE QSYNGNSLRS SWLQRRSKNT  780
EVDVRIVDDE VTVKLVQQKR INCLLFASKV LDELQLDLHH VAGGLIGDYY SFLFNSKISE  840
GSTVYASAIA MKLIEVVDIQ YAAIAPANSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	4e-76	bHLH family protein