PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60069.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 405aa MW: 46257.3 Da PI: 6.149

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.3	8.9e-11	205	251	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E+ RR + N++f+ Lr+l+P++ +K + ++i A+ YI++L PHT60069.1 205 MKHHASEKLRRIHFNDKFQALRTLMPNP-----PKKDRVTIIVDAIGYINEL 251 6899*********************9.....799***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MYAGESLSFD PTSQQNEVLD EKGLLQDHIP TTCVTNFSMG EELQQKFHSS ENNNMNVQEF 60 GHHDEHTNTV LPCVHPNWEE IGFNPYNNQL LSYPISSSLG HLEGFHQRTE IPSTSTNLFY 120 EPPQLNMPIN LCTQQPSLFK DLFHLSPHGS SYGLDSSGTG SLFSHGHHEE EVTAALYHDG 180 SFHHEFSTGD MINSAAIKKR EGKDMKHHAS EKLRRIHFND KFQALRTLMP NPPKKDRVTI 240 IVDAIGYINE LKMRVNELKN EIDLKKEMMR MKRQRIVEED GAMIMEADED QVVMNKSIMS 300 NWHHQRKCTK NSSTEVDVRV MEDEVSIKLV QQKEMMIKKR MNCLVFVSKA LDELQLDLQH 360 VAGGLIGDHY SYLFNSKICE GCTVYASAIA NKVIEVLDKE HATIN

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MYAGESLSFD PTSQQNEVLD EKGLLQDHIP TTCVTNFSMG EELQQKFHSS ENNNMNVQEF  60
GHHDEHTNTV LPCVHPNWEE IGFNPYNNQL LSYPISSSLG HLEGFHQRTE IPSTSTNLFY  120
EPPQLNMPIN LCTQQPSLFK DLFHLSPHGS SYGLDSSGTG SLFSHGHHEE EVTAALYHDG  180
SFHHEFSTGD MINSAAIKKR EGKDMKHHAS EKLRRIHFND KFQALRTLMP NPPKKDRVTI  240
IVDAIGYINE LKMRVNELKN EIDLKKEMMR MKRQRIVEED GAMIMEADED QVVMNKSIMS  300
NWHHQRKCTK NSSTEVDVRV MEDEVSIKLV QQKEMMIKKR MNCLVFVSKA LDELQLDLQH  360
VAGGLIGDHY SYLFNSKICE GCTVYASAIA NKVIEVLDKE HATIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	7e-52	bHLH family protein