PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60419.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 315aa MW: 35725.3 Da PI: 8.5003

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	9.5e-06	62	83	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk + +s++k H++t+ PHT60419.1 62 ICEKCGKGYAVQSDYKAHLKTC 83 7*******************98 PP
2	zf-C2H2	11.5	0.00091	91	109	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ PHT60419.1 91 DCGRVFSRVESFIEHQDTC 109 9***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MHRRRHKVPW KLVKNENPQV KKRVFVCPEP SCLHHDPCHA LGDLVGIKKH FRRKHSSNKQ 60 WICEKCGKGY AVQSDYKAHL KTCGTRGHSC DCGRVFSRVE SFIEHQDTCT VRRSIRPDLQ 120 TLQPTTACSS RTASSTSPSS DTNLQKITTM PLQHNLELGL LPSITTTSHD QHHENHHQEN 180 QEPHLKLSIG GSSSSQCIVP KNGQEENEVV LNLAMAERAY AEEARRHAKR EMEYAEMEFA 240 NAKRIRQQAQ GEIERARKLK EEAIKKISSS ILEITCHACK NKFQENAPIE NNNNIESSPA 300 MSYMSSATTD IEGEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.2	1e-93	C2H2 family protein