PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT60590.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 292aa    MW: 33918.1 Da    PI: 8.8296
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT60590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.75.7e-1130107291
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 fY+e ++ + F v+k+++kk+   g+ +  tf C +  k++ ++          +++r++Cka+++ + ++dg   vtk+ leHnHel p
  PHT60590.1  30 FYKEQSRLTDFGVVKKSTKKE--AGQLKYVTFGCDRCQKTTARN----------QSKRVDCKARVNCRVMNDGSCIVTKIILEHNHELEP 107
                 9**************998887..8999*******9987777655..........559******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MHDDSYTEEQ YTTDLVEGMC FRCVKSVFTF YKEQSRLTDF GVVKKSTKKE AGQLKYVTFG  60
CDRCQKTTAR NQSKRVDCKA RVNCRVMNDG SCIVTKIILE HNHELEPALP DFFPCHKKLR  120
RTVKRSLVAY DIAGLRPSKS IRLLEVEAGG PERMRTWLTA MGEIPSTAIL IDQCESIKAA  180
IGEMLPNTIH RNDEVNHINS KKKFIVVAVV EDMKPTEESS DDVKRDTKQV FKAMAELDEQ  240
MRRSQDRLEF MIIRINATEE RFKVIRKEIF DQYRKDQANF LQLKQHRHIL CS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120126RRTVKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.29e-08FAR1 family protein