PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT60601.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 279aa    MW: 31551.3 Da    PI: 10.7971
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT60601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.2e-1286126755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++++rRRdriN ++  L++l+P+a        +Ka++Le++++Y+k+Lq
  PHT60601.1  86 QVDQRRRDRINGKMKALQKLVPNA--------NKASMLEEVIKYLKQLQ 126
                 689*********************........9***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MKTILALLDA LSRDLARANA SLKKIHSDVV TMRERLDRME SRRNSRVFPP ETLLPMTNPP  60
RQPHNTTSQA PNSPQNREQD RPLPPQVDQR RRDRINGKMK ALQKLVPNAN KASMLEEVIK  120
YLKQLQAQVQ LITSARNMEQ QMMMMSLGMQ PHIQMPLLAR MLNNMTANLP RAPYHSLTTT  180
PLFYPTSSIP NLCPPFISPA FAMTSSIPNG DSISSTVTKS AAAPNIANTS FPFNHPYSAF  240
LSQSMKVEFN NEMASQYQSM QTRNSKFNQE NINIQGQKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.13e-14bHLH family protein