PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60607.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 239aa MW: 26716.3 Da PI: 8.0841

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.3	1.4e-32	165	223	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ PHT60607.1 165 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 223 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MERGGAERDH QLNNYNLQVS FSSSSVAANN IHELGFVHFA DHNLSFLAPS SQSSQISQPL 60 QAAGVSVTPP TTINTNVAAG GSNNVTGGLG FSHNELVINR SSWNSDQVET LDPKAVNDEN 120 CGGNANEGNN SWWKTSSSDK GKVKIRRKLR EPRFCFQTRS DIDVLDDGYK WRKYGQKVVK 180 NSLHPRSYYR CTHSNCRVKK RVERLSEDCR MVITTYEGRH NHSPCDDSNS SDHDCFTSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	150	KIRRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	2e-67	WRKY family protein